bio
Group Leader's professional profile
Basics
Name | Chun Shen Lim |
Label | Experimental and computational biologist |
chunshen.lim@otago.ac.nz | |
Url | https://compgenom.github.io/ |
Work
- 2020 - Present
Research Fellow
Department of Biochemistry, University of Otago
Group leader
- Awarded a Marsden Fast-Start Grant to establish independent research.
Education
-
2015 - 2018 Dunedin, NZ
Interests
Bioinformatics and Computational Biology | |
Data Mining | |
Genomics | |
Transcriptomics | |
Molecular Evolution | |
Machine Learning | |
Simulations |
Cell and Molecular Biology | |
Gene Expression | |
Translation | |
Splicing | |
Reporter | |
Amber Suppression | |
Droplet Digital PCR | |
Sequencing |
Projects
- 2022 - Present
Deciphering translation of the ‘untranslated’ regions of messenger RNAs
Marsden Fast-Start Grant funded by the Royal Society Te Apārangi. Principal Investigator, $360,000
- Upstream Open Reading Frame
- Translation
- 2023 - Present
Rapid identification of leads for antimicrobials
HRC Explorer Grant funded by the Health Research Council of New Zealand. Co-Investigator, $150,000
- Bioactives
- Enzymes
- 2022 - 2023
Deciphering translation of the ‘untranslated’ regions of messenger RNAs
University of Otago Research Grant, University of Otago. Principal Investigator, $36,147
- Upstream Open Reading Frame
- Translation
- 2023 - 2023
NativeCLIP - transcriptome-wide footprinting of protein-RNA binding sites using single-molecule sequencing of native RNAs
Otago Medical School Foundation Trust/School of Biomedical Sciences, University of Otago. Principal Investigator, $21,512
- Nanopore
- direct RNA sequencing
- 2022 - 2023
A commercialisation project
Otago Innovation Limited-University of Otago (OIL-UoO) Grant. Co-Investigator, $76,542
Volunteer
- 2021 - Present
- 2018 - 2018